Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Syn1O88935 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Syn1O88935 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.84■□□□□ 0.45
Syn1O88935 Gm13401-201ENSMUST00000117074 291 ntBASIC17.84■□□□□ 0.45
Syn1O88935 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.84■□□□□ 0.45
Syn1O88935 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.84■□□□□ 0.45
Syn1O88935 Il3ra-202ENSMUST00000223589 738 ntBASIC17.84■□□□□ 0.45
Syn1O88935 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Syn1O88935 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.84■□□□□ 0.45
Syn1O88935 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.84■□□□□ 0.45
Syn1O88935 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.84■□□□□ 0.45
Syn1O88935 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Syn1O88935 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.83■□□□□ 0.45
Syn1O88935 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.83■□□□□ 0.45
Syn1O88935 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Syn1O88935 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syn1O88935 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syn1O88935 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syn1O88935 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syn1O88935 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.83■□□□□ 0.45
Syn1O88935 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Syn1O88935 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syn1O88935 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syn1O88935 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syn1O88935 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.83■□□□□ 0.44
Syn1O88935 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Syn1O88935 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.83■□□□□ 0.44
Syn1O88935 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.83■□□□□ 0.44
Syn1O88935 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.83■□□□□ 0.44
Syn1O88935 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.83■□□□□ 0.44
Syn1O88935 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.83■□□□□ 0.44
Syn1O88935 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.83■□□□□ 0.44
Syn1O88935 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Syn1O88935 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syn1O88935 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Syn1O88935 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Syn1O88935 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Syn1O88935 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.82■□□□□ 0.44
Syn1O88935 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.82■□□□□ 0.44
Syn1O88935 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.82■□□□□ 0.44
Syn1O88935 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.82■□□□□ 0.44
Syn1O88935 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Syn1O88935 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Syn1O88935 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.81■□□□□ 0.44
Syn1O88935 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syn1O88935 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syn1O88935 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syn1O88935 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.81■□□□□ 0.44
Syn1O88935 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Syn1O88935 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Syn1O88935 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.81■□□□□ 0.44
Syn1O88935 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.81■□□□□ 0.44
Syn1O88935 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syn1O88935 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syn1O88935 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Syn1O88935 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.81■□□□□ 0.44
Syn1O88935 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syn1O88935 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.81■□□□□ 0.44
Syn1O88935 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syn1O88935 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syn1O88935 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syn1O88935 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syn1O88935 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Syn1O88935 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Syn1O88935 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Syn1O88935 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syn1O88935 Gm15794-201ENSMUST00000120182 631 ntBASIC17.8■□□□□ 0.44
Syn1O88935 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.8■□□□□ 0.44
Syn1O88935 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.8■□□□□ 0.44
Syn1O88935 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Syn1O88935 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.8■□□□□ 0.44
Syn1O88935 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syn1O88935 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Syn1O88935 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syn1O88935 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.79■□□□□ 0.44
Syn1O88935 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Syn1O88935 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Syn1O88935 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syn1O88935 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.79■□□□□ 0.44
Syn1O88935 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Syn1O88935 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms