Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Flg-201ENSMUST00000050758 1488 ntBASIC12.3□□□□□ -0.44
Sh2d1aO88890 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.3□□□□□ -0.44
Sh2d1aO88890 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.3□□□□□ -0.44
Sh2d1aO88890 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.3□□□□□ -0.44
Sh2d1aO88890 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.29□□□□□ -0.44
Sh2d1aO88890 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.29□□□□□ -0.44
Sh2d1aO88890 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.29□□□□□ -0.44
Sh2d1aO88890 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Gm38285-201ENSMUST00000192928 922 ntBASIC12.28□□□□□ -0.44
Sh2d1aO88890 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Mtag2-201ENSMUST00000058665 714 ntBASIC12.28□□□□□ -0.44
Sh2d1aO88890 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Zfp783-201ENSMUST00000095946 670 ntBASIC12.28□□□□□ -0.44
Sh2d1aO88890 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sh2d1aO88890 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.28□□□□□ -0.44
Sh2d1aO88890 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.27□□□□□ -0.44
Sh2d1aO88890 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Sh2d1aO88890 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Gm2559-201ENSMUST00000201323 363 ntBASIC12.27□□□□□ -0.45
Sh2d1aO88890 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms