Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Best1O88870 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Best1O88870 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Best1O88870 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Best1O88870 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Best1O88870 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Best1O88870 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Best1O88870 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Best1O88870 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.69■□□□□ 0.26
Best1O88870 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Best1O88870 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Best1O88870 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.69■□□□□ 0.26
Best1O88870 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Best1O88870 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.68■□□□□ 0.26
Best1O88870 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.68■□□□□ 0.26
Best1O88870 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.68■□□□□ 0.26
Best1O88870 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Gm7213-201ENSMUST00000215977 950 ntBASIC16.68■□□□□ 0.26
Best1O88870 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.68■□□□□ 0.26
Best1O88870 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.68■□□□□ 0.26
Best1O88870 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Best1O88870 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.68■□□□□ 0.26
Best1O88870 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.68■□□□□ 0.26
Best1O88870 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Best1O88870 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Best1O88870 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.67■□□□□ 0.26
Best1O88870 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Best1O88870 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Best1O88870 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.67■□□□□ 0.26
Best1O88870 Gm27389-201ENSMUST00000183622 195 ntBASIC16.67■□□□□ 0.26
Best1O88870 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.67■□□□□ 0.26
Best1O88870 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Best1O88870 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.67■□□□□ 0.26
Best1O88870 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Best1O88870 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.67■□□□□ 0.26
Best1O88870 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Best1O88870 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.66■□□□□ 0.26
Best1O88870 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Best1O88870 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Gm18958-201ENSMUST00000174258 762 ntBASIC16.66■□□□□ 0.26
Best1O88870 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Best1O88870 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Best1O88870 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Best1O88870 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Best1O88870 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Best1O88870 Gm23634-201ENSMUST00000175071 91 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms