Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ClppO88696 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClppO88696 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClppO88696 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.91■□□□□ 0.3
ClppO88696 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClppO88696 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.91■□□□□ 0.3
ClppO88696 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.91■□□□□ 0.3
ClppO88696 Gm30025-201ENSMUST00000218555 728 ntBASIC16.91■□□□□ 0.3
ClppO88696 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClppO88696 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClppO88696 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.91■□□□□ 0.3
ClppO88696 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.91■□□□□ 0.3
ClppO88696 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.91■□□□□ 0.3
ClppO88696 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClppO88696 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClppO88696 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClppO88696 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ClppO88696 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.9■□□□□ 0.3
ClppO88696 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClppO88696 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ClppO88696 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ClppO88696 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ClppO88696 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ClppO88696 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ClppO88696 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Gm43799-201ENSMUST00000201845 579 ntBASIC16.89■□□□□ 0.29
ClppO88696 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClppO88696 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ClppO88696 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ClppO88696 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ClppO88696 Mir2861-201ENSMUST00000175539 82 ntBASIC16.88■□□□□ 0.29
ClppO88696 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ClppO88696 Gm3375-201ENSMUST00000203929 796 ntBASIC16.88■□□□□ 0.29
ClppO88696 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.88■□□□□ 0.29
ClppO88696 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ClppO88696 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClppO88696 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ClppO88696 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ClppO88696 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ClppO88696 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.87■□□□□ 0.29
ClppO88696 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.87■□□□□ 0.29
ClppO88696 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
ClppO88696 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ClppO88696 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClppO88696 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ClppO88696 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms