Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Gm8587-201ENSMUST00000076538 843 ntBASIC18.33■□□□□ 0.52
Psmc3O88685 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Psmc3O88685 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Psmc3O88685 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Psmc3O88685 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Psmc3O88685 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Psmc3O88685 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Psmc3O88685 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Psmc3O88685 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Psmc3O88685 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Psmc3O88685 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Psmc3O88685 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Psmc3O88685 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Psmc3O88685 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Psmc3O88685 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Psmc3O88685 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.32■□□□□ 0.52
Psmc3O88685 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.32■□□□□ 0.52
Psmc3O88685 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Psmc3O88685 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.31■□□□□ 0.52
Psmc3O88685 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
Psmc3O88685 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Psmc3O88685 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.31■□□□□ 0.52
Psmc3O88685 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.31■□□□□ 0.52
Psmc3O88685 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Psmc3O88685 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.31■□□□□ 0.52
Psmc3O88685 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Psmc3O88685 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Psmc3O88685 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Psmc3O88685 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Psmc3O88685 Tgds-204ENSMUST00000228543 1594 ntBASIC18.3■□□□□ 0.52
Psmc3O88685 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Psmc3O88685 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Psmc3O88685 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Psmc3O88685 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.3■□□□□ 0.52
Psmc3O88685 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.3■□□□□ 0.52
Psmc3O88685 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Psmc3O88685 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.3■□□□□ 0.52
Psmc3O88685 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Psmc3O88685 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Psmc3O88685 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.29■□□□□ 0.52
Psmc3O88685 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Gm29791-202ENSMUST00000207888 369 ntBASIC18.29■□□□□ 0.52
Psmc3O88685 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.29■□□□□ 0.52
Psmc3O88685 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.29■□□□□ 0.52
Psmc3O88685 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.29■□□□□ 0.52
Psmc3O88685 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Psmc3O88685 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.28■□□□□ 0.52
Psmc3O88685 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms