Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Gm37935-201ENSMUST00000192012 982 ntBASIC18.93■□□□□ 0.62
Slc6a20bO88575 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.93■□□□□ 0.62
Slc6a20bO88575 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.93■□□□□ 0.62
Slc6a20bO88575 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.93■□□□□ 0.62
Slc6a20bO88575 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.92■□□□□ 0.62
Slc6a20bO88575 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Slc6a20bO88575 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Gm18206-201ENSMUST00000207027 926 ntBASIC18.92■□□□□ 0.62
Slc6a20bO88575 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20bO88575 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.92■□□□□ 0.62
Slc6a20bO88575 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Slc6a20bO88575 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20bO88575 BC021767-201ENSMUST00000126387 1716 ntBASIC18.91■□□□□ 0.62
Slc6a20bO88575 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a20bO88575 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20bO88575 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Gm10052-201ENSMUST00000168019 960 ntBASIC18.9■□□□□ 0.62
Slc6a20bO88575 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Gm18195-201ENSMUST00000207604 706 ntBASIC18.9■□□□□ 0.62
Slc6a20bO88575 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Gm7729-201ENSMUST00000050143 801 ntBASIC18.9■□□□□ 0.62
Slc6a20bO88575 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a20bO88575 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Slc6a20bO88575 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.89■□□□□ 0.61
Slc6a20bO88575 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.88■□□□□ 0.61
Slc6a20bO88575 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Golph3-205ENSMUST00000228671 2842 ntBASIC18.88■□□□□ 0.61
Slc6a20bO88575 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a20bO88575 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms