Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr1O70481 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr1O70481 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
Ubr1O70481 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
Ubr1O70481 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr1O70481 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
Ubr1O70481 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr1O70481 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr1O70481 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ubr1O70481 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ubr1O70481 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ubr1O70481 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ubr1O70481 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ubr1O70481 Gm13186-201ENSMUST00000118031 316 ntBASIC22.6■■□□□ 1.21
Ubr1O70481 Gm18115-201ENSMUST00000221209 621 ntBASIC22.6■■□□□ 1.21
Ubr1O70481 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ubr1O70481 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC22.59■■□□□ 1.21
Ubr1O70481 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
Ubr1O70481 Gm24589-201ENSMUST00000116692 94 ntBASIC22.59■■□□□ 1.21
Ubr1O70481 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
Ubr1O70481 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Phf7-203ENSMUST00000226565 1971 ntBASIC22.59■■□□□ 1.21
Ubr1O70481 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ubr1O70481 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ubr1O70481 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC22.58■■□□□ 1.21
Ubr1O70481 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ubr1O70481 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ubr1O70481 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ubr1O70481 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Ubr1O70481 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC22.58■■□□□ 1.2
Ubr1O70481 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Ubr1O70481 AC122351.1-201ENSMUST00000220467 126 ntBASIC22.58■■□□□ 1.2
Ubr1O70481 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Ubr1O70481 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ubr1O70481 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Ubr1O70481 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ubr1O70481 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Ubr1O70481 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Ubr1O70481 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ubr1O70481 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC22.57■■□□□ 1.2
Ubr1O70481 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Ubr1O70481 AC164629.2-201ENSMUST00000217916 270 ntBASIC22.57■■□□□ 1.2
Ubr1O70481 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ubr1O70481 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Ubr1O70481 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ubr1O70481 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ubr1O70481 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ubr1O70481 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubr1O70481 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubr1O70481 Gm45328-201ENSMUST00000210942 917 ntBASIC22.56■■□□□ 1.2
Ubr1O70481 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubr1O70481 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubr1O70481 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubr1O70481 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubr1O70481 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC22.56■■□□□ 1.2
Ubr1O70481 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC22.56■■□□□ 1.2
Ubr1O70481 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubr1O70481 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ubr1O70481 Gm11336-201ENSMUST00000118168 334 ntBASIC22.55■■□□□ 1.2
Ubr1O70481 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC22.55■■□□□ 1.2
Ubr1O70481 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Ubr1O70481 Gm44450-201ENSMUST00000199528 114 ntBASIC22.55■■□□□ 1.2
Ubr1O70481 Gm18421-201ENSMUST00000204122 625 ntBASIC22.55■■□□□ 1.2
Ubr1O70481 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ubr1O70481 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC22.55■■□□□ 1.2
Ubr1O70481 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ubr1O70481 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ubr1O70481 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ubr1O70481 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ubr1O70481 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ubr1O70481 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ubr1O70481 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ubr1O70481 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ubr1O70481 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
Ubr1O70481 AC133598.3-202ENSMUST00000224219 531 ntBASIC22.54■■□□□ 1.2
Ubr1O70481 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ubr1O70481 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
Ubr1O70481 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ubr1O70481 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ubr1O70481 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ubr1O70481 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ubr1O70481 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ubr1O70481 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ubr1O70481 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ubr1O70481 Gm6190-201ENSMUST00000220683 1374 ntBASIC22.53■■□□□ 1.2
Ubr1O70481 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ubr1O70481 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ubr1O70481 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC22.53■■□□□ 1.2
Ubr1O70481 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ubr1O70481 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ubr1O70481 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Ubr1O70481 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms