Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1i3O35627 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nr1i3O35627 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.67■□□□□ 0.58
Nr1i3O35627 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1i3O35627 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.66■□□□□ 0.58
Nr1i3O35627 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.66■□□□□ 0.58
Nr1i3O35627 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.66■□□□□ 0.58
Nr1i3O35627 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.66■□□□□ 0.58
Nr1i3O35627 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.66■□□□□ 0.58
Nr1i3O35627 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nr1i3O35627 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1i3O35627 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.65■□□□□ 0.58
Nr1i3O35627 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.65■□□□□ 0.58
Nr1i3O35627 Gm18025-201ENSMUST00000221733 862 ntBASIC18.65■□□□□ 0.58
Nr1i3O35627 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1i3O35627 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr1i3O35627 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr1i3O35627 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr1i3O35627 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.64■□□□□ 0.57
Nr1i3O35627 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1i3O35627 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1i3O35627 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.64■□□□□ 0.57
Nr1i3O35627 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1i3O35627 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1i3O35627 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.64■□□□□ 0.57
Nr1i3O35627 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1i3O35627 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.64■□□□□ 0.57
Nr1i3O35627 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1i3O35627 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1i3O35627 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1i3O35627 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1i3O35627 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1i3O35627 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1i3O35627 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nr1i3O35627 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.63■□□□□ 0.57
Nr1i3O35627 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nr1i3O35627 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1i3O35627 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1i3O35627 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1i3O35627 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1i3O35627 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1i3O35627 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.62■□□□□ 0.57
Nr1i3O35627 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1i3O35627 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1i3O35627 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.62■□□□□ 0.57
Nr1i3O35627 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Nr1i3O35627 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1i3O35627 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1i3O35627 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.62■□□□□ 0.57
Nr1i3O35627 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.62■□□□□ 0.57
Nr1i3O35627 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1i3O35627 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1i3O35627 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms