Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.94■□□□□ 0.3
Npc1O35604 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Npc1O35604 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.93■□□□□ 0.3
Npc1O35604 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Gm4974-201ENSMUST00000209974 875 ntBASIC16.93■□□□□ 0.3
Npc1O35604 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Npc1O35604 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Npc1O35604 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.93■□□□□ 0.3
Npc1O35604 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.93■□□□□ 0.3
Npc1O35604 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.93■□□□□ 0.3
Npc1O35604 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.93■□□□□ 0.3
Npc1O35604 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Npc1O35604 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Npc1O35604 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.92■□□□□ 0.3
Npc1O35604 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Npc1O35604 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Gm10517-202ENSMUST00000192970 758 ntBASIC16.92■□□□□ 0.3
Npc1O35604 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Npc1O35604 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Npc1O35604 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Npc1O35604 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Gm5417-201ENSMUST00000079706 384 ntBASIC16.91■□□□□ 0.3
Npc1O35604 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Npc1O35604 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Npc1O35604 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Mir7071-201ENSMUST00000184847 69 ntBASIC16.9■□□□□ 0.3
Npc1O35604 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Npc1O35604 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Npc1O35604 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Npc1O35604 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Npc1O35604 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.89■□□□□ 0.29
Npc1O35604 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Npc1O35604 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms