Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Abca4O35600 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Abca4O35600 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Abca4O35600 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Abca4O35600 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.33■□□□□ 0.2
Abca4O35600 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Abca4O35600 Gm43767-201ENSMUST00000198933 381 ntBASIC16.33■□□□□ 0.2
Abca4O35600 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Abca4O35600 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Abca4O35600 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Abca4O35600 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Abca4O35600 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Abca4O35600 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Abca4O35600 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Abca4O35600 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Abca4O35600 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Abca4O35600 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Abca4O35600 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Abca4O35600 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.33■□□□□ 0.2
Abca4O35600 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.32■□□□□ 0.2
Abca4O35600 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Abca4O35600 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.32■□□□□ 0.2
Abca4O35600 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.32■□□□□ 0.2
Abca4O35600 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Abca4O35600 Gm23547-201ENSMUST00000158210 271 ntBASIC16.31■□□□□ 0.2
Abca4O35600 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.31■□□□□ 0.2
Abca4O35600 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Abca4O35600 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.31■□□□□ 0.2
Abca4O35600 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Abca4O35600 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.31■□□□□ 0.2
Abca4O35600 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Abca4O35600 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Abca4O35600 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Abca4O35600 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Abca4O35600 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.3■□□□□ 0.2
Abca4O35600 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.3■□□□□ 0.2
Abca4O35600 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Abca4O35600 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Abca4O35600 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.3■□□□□ 0.2
Abca4O35600 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Abca4O35600 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Abca4O35600 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Abca4O35600 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.3■□□□□ 0.2
Abca4O35600 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Abca4O35600 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Abca4O35600 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.29■□□□□ 0.2
Abca4O35600 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.29■□□□□ 0.2
Abca4O35600 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Gm5745-201ENSMUST00000183748 313 ntBASIC16.29■□□□□ 0.2
Abca4O35600 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.29■□□□□ 0.2
Abca4O35600 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Abca4O35600 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Abca4O35600 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.28■□□□□ 0.2
Abca4O35600 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca4O35600 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Abca4O35600 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms