Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.9■□□□□ 0.62
Clk2O35491 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clk2O35491 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.9■□□□□ 0.62
Clk2O35491 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Clk2O35491 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clk2O35491 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clk2O35491 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clk2O35491 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Clk2O35491 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Clk2O35491 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Clk2O35491 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk2O35491 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk2O35491 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Clk2O35491 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk2O35491 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clk2O35491 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Clk2O35491 Gm18101-201ENSMUST00000215769 548 ntBASIC18.89■□□□□ 0.61
Clk2O35491 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk2O35491 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clk2O35491 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Clk2O35491 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.88■□□□□ 0.61
Clk2O35491 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.88■□□□□ 0.61
Clk2O35491 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.88■□□□□ 0.61
Clk2O35491 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.88■□□□□ 0.61
Clk2O35491 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Clk2O35491 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clk2O35491 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.88■□□□□ 0.61
Clk2O35491 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.88■□□□□ 0.61
Clk2O35491 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk2O35491 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk2O35491 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Clk2O35491 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Clk2O35491 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clk2O35491 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clk2O35491 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk2O35491 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Clk2O35491 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clk2O35491 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Clk2O35491 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Clk2O35491 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Clk2O35491 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Clk2O35491 Gm23634-201ENSMUST00000175071 91 ntBASIC18.86■□□□□ 0.61
Clk2O35491 Mir1668-201ENSMUST00000184114 107 ntBASIC18.86■□□□□ 0.61
Clk2O35491 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Clk2O35491 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Clk2O35491 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clk2O35491 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.85■□□□□ 0.61
Clk2O35491 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.85■□□□□ 0.61
Clk2O35491 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clk2O35491 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Clk2O35491 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk2O35491 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Clk2O35491 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk2O35491 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.84■□□□□ 0.61
Clk2O35491 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Clk2O35491 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clk2O35491 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clk2O35491 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.84■□□□□ 0.61
Clk2O35491 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.84■□□□□ 0.61
Clk2O35491 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms