Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Atf6bO35451 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.06■□□□□ 0
Atf6bO35451 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.06■□□□□ 0
Atf6bO35451 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.06■□□□□ 0
Atf6bO35451 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atf6bO35451 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Atf6bO35451 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Atf6bO35451 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Atf6bO35451 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.05■□□□□ -0
Atf6bO35451 Gm42545-201ENSMUST00000202755 922 ntBASIC15.05■□□□□ -0
Atf6bO35451 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.05■□□□□ -0
Atf6bO35451 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.05■□□□□ -0
Atf6bO35451 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Atf6bO35451 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.05■□□□□ -0
Atf6bO35451 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.04■□□□□ -0
Atf6bO35451 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6bO35451 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Atf6bO35451 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf6bO35451 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Atf6bO35451 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.04■□□□□ -0
Atf6bO35451 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6bO35451 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.04■□□□□ -0
Atf6bO35451 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf6bO35451 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf6bO35451 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Atf6bO35451 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.04■□□□□ -0
Atf6bO35451 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Atf6bO35451 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.04■□□□□ -0
Atf6bO35451 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.04■□□□□ -0
Atf6bO35451 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.04■□□□□ -0
Atf6bO35451 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.04■□□□□ -0
Atf6bO35451 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Atf6bO35451 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.04■□□□□ -0
Atf6bO35451 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6bO35451 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf6bO35451 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Atf6bO35451 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.03■□□□□ -0
Atf6bO35451 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.03■□□□□ -0
Atf6bO35451 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6bO35451 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Atf6bO35451 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6bO35451 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.02■□□□□ -0
Atf6bO35451 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Atf6bO35451 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.02■□□□□ -0
Atf6bO35451 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.02■□□□□ -0
Atf6bO35451 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.02■□□□□ -0
Atf6bO35451 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.02■□□□□ -0
Atf6bO35451 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.02■□□□□ -0
Atf6bO35451 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6bO35451 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms