Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac1O09106 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.69■□□□□ 0.9
Hdac1O09106 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.69■□□□□ 0.9
Hdac1O09106 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.69■□□□□ 0.9
Hdac1O09106 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac1O09106 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac1O09106 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac1O09106 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.68■□□□□ 0.9
Hdac1O09106 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac1O09106 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Hdac1O09106 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.68■□□□□ 0.9
Hdac1O09106 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac1O09106 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac1O09106 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hdac1O09106 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac1O09106 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.68■□□□□ 0.9
Hdac1O09106 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac1O09106 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac1O09106 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac1O09106 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hdac1O09106 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac1O09106 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.67■□□□□ 0.9
Hdac1O09106 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hdac1O09106 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac1O09106 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac1O09106 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac1O09106 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac1O09106 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac1O09106 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac1O09106 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac1O09106 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hdac1O09106 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hdac1O09106 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac1O09106 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.66■□□□□ 0.9
Hdac1O09106 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac1O09106 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac1O09106 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac1O09106 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac1O09106 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac1O09106 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac1O09106 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac1O09106 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.65■□□□□ 0.9
Hdac1O09106 Gm18284-201ENSMUST00000172604 624 ntBASIC20.65■□□□□ 0.9
Hdac1O09106 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac1O09106 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac1O09106 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac1O09106 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac1O09106 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac1O09106 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac1O09106 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.64■□□□□ 0.9
Hdac1O09106 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac1O09106 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Hdac1O09106 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.64■□□□□ 0.89
Hdac1O09106 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.64■□□□□ 0.89
Hdac1O09106 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Hdac1O09106 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac1O09106 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac1O09106 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac1O09106 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac1O09106 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Hdac1O09106 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac1O09106 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Hdac1O09106 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac1O09106 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Hdac1O09106 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Hdac1O09106 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.63■□□□□ 0.89
Hdac1O09106 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Hdac1O09106 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Hdac1O09106 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.63■□□□□ 0.89
Hdac1O09106 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.63■□□□□ 0.89
Hdac1O09106 Gm10138-203ENSMUST00000206952 366 ntBASIC20.63■□□□□ 0.89
Hdac1O09106 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac1O09106 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hdac1O09106 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac1O09106 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms