Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Polr2jO08740 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Polr2jO08740 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.68■□□□□ 0.26
Polr2jO08740 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.68■□□□□ 0.26
Polr2jO08740 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.68■□□□□ 0.26
Polr2jO08740 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Polr2jO08740 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Polr2jO08740 Flg-201ENSMUST00000050758 1488 ntBASIC16.67■□□□□ 0.26
Polr2jO08740 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Polr2jO08740 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.67■□□□□ 0.26
Polr2jO08740 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Polr2jO08740 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
Polr2jO08740 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Polr2jO08740 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.67■□□□□ 0.26
Polr2jO08740 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Polr2jO08740 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Polr2jO08740 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.67■□□□□ 0.26
Polr2jO08740 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Polr2jO08740 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.67■□□□□ 0.26
Polr2jO08740 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Polr2jO08740 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Polr2jO08740 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Polr2jO08740 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Polr2jO08740 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Polr2jO08740 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Polr2jO08740 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Polr2jO08740 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Polr2jO08740 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Polr2jO08740 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.65■□□□□ 0.26
Polr2jO08740 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Polr2jO08740 Mir2861-201ENSMUST00000175539 82 ntBASIC16.65■□□□□ 0.26
Polr2jO08740 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.65■□□□□ 0.26
Polr2jO08740 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Polr2jO08740 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Polr2jO08740 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Polr2jO08740 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.64■□□□□ 0.25
Polr2jO08740 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Polr2jO08740 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.64■□□□□ 0.25
Polr2jO08740 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Polr2jO08740 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
Polr2jO08740 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.64■□□□□ 0.25
Polr2jO08740 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.64■□□□□ 0.25
Polr2jO08740 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Polr2jO08740 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Polr2jO08740 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Polr2jO08740 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Polr2jO08740 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Polr2jO08740 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Polr2jO08740 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms