Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim34bJ3QNR8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.27■■□□□ 1
Trim34bJ3QNR8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34bJ3QNR8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34bJ3QNR8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trim34bJ3QNR8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34bJ3QNR8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.26■□□□□ 0.99
Trim34bJ3QNR8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34bJ3QNR8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34bJ3QNR8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Trim34bJ3QNR8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34bJ3QNR8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34bJ3QNR8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34bJ3QNR8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34bJ3QNR8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.23■□□□□ 0.99
Trim34bJ3QNR8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Gm14859-201ENSMUST00000117752 357 ntBASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim34bJ3QNR8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Gm5587-201ENSMUST00000206270 674 ntBASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Trim34bJ3QNR8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trim34bJ3QNR8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trim34bJ3QNR8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Gm9013-201ENSMUST00000132939 882 ntBASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim34bJ3QNR8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms