Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Gm43183-201ENSMUST00000200632 547 ntBASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna9G3X8Z7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Gm18666-201ENSMUST00000190039 958 ntBASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Gm10517-202ENSMUST00000192970 758 ntBASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Trmt13-210ENSMUST00000198454 880 ntBASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna9G3X8Z7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Gm12382-201ENSMUST00000122005 922 ntBASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna9G3X8Z7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chrna9G3X8Z7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chrna9G3X8Z7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Chrna9G3X8Z7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Gm24841-201ENSMUST00000158676 357 ntBASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Haglr-201ENSMUST00000100000 2085 ntBASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna9G3X8Z7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Gm5643-201ENSMUST00000117081 966 ntBASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Gm13216-201ENSMUST00000117145 591 ntBASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Gm10698-201ENSMUST00000182663 604 ntBASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chrna9G3X8Z7 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna9G3X8Z7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna9G3X8Z7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms