Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.84■□□□□ 0.93
NpcdF8VQB8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NpcdF8VQB8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NpcdF8VQB8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.83■□□□□ 0.93
NpcdF8VQB8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NpcdF8VQB8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NpcdF8VQB8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NpcdF8VQB8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NpcdF8VQB8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.83■□□□□ 0.93
NpcdF8VQB8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NpcdF8VQB8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NpcdF8VQB8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NpcdF8VQB8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NpcdF8VQB8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NpcdF8VQB8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NpcdF8VQB8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NpcdF8VQB8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
NpcdF8VQB8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.82■□□□□ 0.92
NpcdF8VQB8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Gm10566-201ENSMUST00000086739 996 ntBASIC20.82■□□□□ 0.92
NpcdF8VQB8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NpcdF8VQB8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NpcdF8VQB8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Actl10-202ENSMUST00000226583 1501 ntBASIC20.8■□□□□ 0.92
NpcdF8VQB8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Gm12895-201ENSMUST00000122214 226 ntBASIC20.8■□□□□ 0.92
NpcdF8VQB8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.8■□□□□ 0.92
NpcdF8VQB8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.8■□□□□ 0.92
NpcdF8VQB8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NpcdF8VQB8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.79■□□□□ 0.92
NpcdF8VQB8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NpcdF8VQB8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.79■□□□□ 0.92
NpcdF8VQB8 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.79■□□□□ 0.92
NpcdF8VQB8 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.79■□□□□ 0.92
NpcdF8VQB8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NpcdF8VQB8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms