Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh11xF6ZNL5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh11xF6ZNL5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh11xF6ZNL5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh11xF6ZNL5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh11xF6ZNL5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Mir1199-201ENSMUST00000117015 119 ntBASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh11xF6ZNL5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Mir7071-201ENSMUST00000184847 69 ntBASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdh11xF6ZNL5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Gm24841-201ENSMUST00000158676 357 ntBASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh11xF6ZNL5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh11xF6ZNL5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh11xF6ZNL5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh11xF6ZNL5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdh11xF6ZNL5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh11xF6ZNL5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Pcdh11xF6ZNL5 Gm715-201ENSMUST00000117865 831 ntBASIC19.14■□□□□ 0.65
Pcdh11xF6ZNL5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh11xF6ZNL5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms