Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.84■□□□□ 0.45
Atf6F6VAN0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf6F6VAN0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Atf6F6VAN0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Atf6F6VAN0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf6F6VAN0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf6F6VAN0 Gm12382-201ENSMUST00000122005 922 ntBASIC17.83■□□□□ 0.44
Atf6F6VAN0 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.83■□□□□ 0.44
Atf6F6VAN0 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.83■□□□□ 0.44
Atf6F6VAN0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf6F6VAN0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atf6F6VAN0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf6F6VAN0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf6F6VAN0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Atf6F6VAN0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf6F6VAN0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf6F6VAN0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Atf6F6VAN0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf6F6VAN0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atf6F6VAN0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.82■□□□□ 0.44
Atf6F6VAN0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Gm37292-201ENSMUST00000192062 758 ntBASIC17.82■□□□□ 0.44
Atf6F6VAN0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf6F6VAN0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf6F6VAN0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms