Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Mir3081-201ENSMUST00000175305 84 ntBASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Gm38027-201ENSMUST00000192315 235 ntBASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.45■□□□□ 0.7
Syngap1F6SEU4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Syngap1F6SEU4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syngap1F6SEU4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Gm9013-201ENSMUST00000132939 882 ntBASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Gm34391-201ENSMUST00000203706 907 ntBASIC19.43■□□□□ 0.7
Syngap1F6SEU4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Syngap1F6SEU4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.42■□□□□ 0.7
Syngap1F6SEU4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Syngap1F6SEU4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Syngap1F6SEU4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Gm18733-201ENSMUST00000173950 856 ntBASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Syngap1F6SEU4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms