Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raph1F2Z3U3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raph1F2Z3U3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
Raph1F2Z3U3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raph1F2Z3U3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raph1F2Z3U3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Raph1F2Z3U3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raph1F2Z3U3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raph1F2Z3U3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raph1F2Z3U3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raph1F2Z3U3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Raph1F2Z3U3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Raph1F2Z3U3 Haglr-201ENSMUST00000100000 2085 ntBASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Raph1F2Z3U3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Raph1F2Z3U3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Raph1F2Z3U3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms