Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Gm10231-201ENSMUST00000181584 441 ntBASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Gm10175-202ENSMUST00000208752 441 ntBASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb9E9Q5G2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Gm2274-201ENSMUST00000184539 609 ntBASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb9E9Q5G2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Gm13836-201ENSMUST00000121159 501 ntBASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb9E9Q5G2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb9E9Q5G2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb9E9Q5G2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Gm18959-201ENSMUST00000208954 655 ntBASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb9E9Q5G2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb9E9Q5G2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.39■□□□□ 0.86
Pcdhb9E9Q5G2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb9E9Q5G2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
Pcdhb9E9Q5G2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.39■□□□□ 0.86
Pcdhb9E9Q5G2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms