Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cpsf4lE9Q2N0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cpsf4lE9Q2N0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cpsf4lE9Q2N0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Mir5122-201ENSMUST00000175004 89 ntBASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Timm23-208ENSMUST00000226683 750 ntBASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4lE9Q2N0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4lE9Q2N0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms