Protein–RNA interactions for Protein: D3YXK1

Samd1, Atherin, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd1D3YXK1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Samd1D3YXK1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Samd1D3YXK1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Samd1D3YXK1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Samd1D3YXK1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Samd1D3YXK1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
Samd1D3YXK1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.7■□□□□ 0.74
Samd1D3YXK1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.7■□□□□ 0.74
Samd1D3YXK1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Samd1D3YXK1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Samd1D3YXK1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms