Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Gm13216-201ENSMUST00000117145 591 ntBASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm12887B1AVM1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm12887B1AVM1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Gm12887B1AVM1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm12887B1AVM1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm12887B1AVM1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Gm12887B1AVM1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm12887B1AVM1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm12887B1AVM1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm12887B1AVM1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Gm13146-201ENSMUST00000118508 780 ntBASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.08□□□□□ -0.16
Gm12887B1AVM1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms