Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.6■□□□□ 0.57
Sh2d4bA6X942 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4bA6X942 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4bA6X942 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4bA6X942 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4bA6X942 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4bA6X942 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh2d4bA6X942 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Sh2d4bA6X942 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4bA6X942 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4bA6X942 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4bA6X942 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4bA6X942 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Sh2d4bA6X942 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4bA6X942 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.58■□□□□ 0.57
Sh2d4bA6X942 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh2d4bA6X942 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4bA6X942 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.58■□□□□ 0.56
Sh2d4bA6X942 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.58■□□□□ 0.56
Sh2d4bA6X942 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4bA6X942 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4bA6X942 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4bA6X942 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh2d4bA6X942 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Mir5130-201ENSMUST00000175160 84 ntBASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d4bA6X942 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Ank2-226ENSMUST00000189368 339 ntBASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh2d4bA6X942 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4bA6X942 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4bA6X942 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4bA6X942 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4bA6X942 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4bA6X942 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sh2d4bA6X942 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4bA6X942 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms