Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Gm45640-201ENSMUST00000210665 1896 ntBASIC9.2□□□□□ -0.94
Ubr4A2AN08 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.19□□□□□ -0.94
Ubr4A2AN08 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Ubr4A2AN08 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm7230-201ENSMUST00000173026 815 ntBASIC9.18□□□□□ -0.94
Ubr4A2AN08 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm43433-201ENSMUST00000196573 481 ntBASIC9.18□□□□□ -0.94
Ubr4A2AN08 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Dmtn-209ENSMUST00000228295 2572 ntBASIC9.18□□□□□ -0.94
Ubr4A2AN08 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm6550-201ENSMUST00000187574 993 ntBASIC9.18□□□□□ -0.94
Ubr4A2AN08 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ubr4A2AN08 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Gm44430-201ENSMUST00000203376 995 ntBASIC9.17□□□□□ -0.94
Ubr4A2AN08 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.17□□□□□ -0.94
Ubr4A2AN08 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ubr4A2AN08 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms