Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IsxA1A546 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.17■□□□□ 0.18
IsxA1A546 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.17■□□□□ 0.18
IsxA1A546 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.17■□□□□ 0.18
IsxA1A546 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IsxA1A546 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.17■□□□□ 0.18
IsxA1A546 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IsxA1A546 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
IsxA1A546 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IsxA1A546 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.16■□□□□ 0.18
IsxA1A546 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IsxA1A546 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.16■□□□□ 0.18
IsxA1A546 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
IsxA1A546 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IsxA1A546 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.15■□□□□ 0.18
IsxA1A546 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
IsxA1A546 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.15■□□□□ 0.18
IsxA1A546 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IsxA1A546 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IsxA1A546 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IsxA1A546 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IsxA1A546 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
IsxA1A546 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IsxA1A546 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
IsxA1A546 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.14■□□□□ 0.17
IsxA1A546 Gm43060-201ENSMUST00000200621 289 ntBASIC16.14■□□□□ 0.17
IsxA1A546 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IsxA1A546 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
IsxA1A546 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.13■□□□□ 0.17
IsxA1A546 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
IsxA1A546 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
IsxA1A546 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.13■□□□□ 0.17
IsxA1A546 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
IsxA1A546 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
IsxA1A546 Gm5874-201ENSMUST00000096101 508 ntBASIC16.13■□□□□ 0.17
IsxA1A546 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms