Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Gm13401-201ENSMUST00000117074 291 ntBASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Haglr-201ENSMUST00000100000 2085 ntBASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav12-1A0N8R1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Gm11927-201ENSMUST00000118472 759 ntBASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Rab3c-203ENSMUST00000224180 967 ntBASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav12-1A0N8R1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Gm11643-201ENSMUST00000119578 864 ntBASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Gm26571-201ENSMUST00000181399 666 ntBASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav12-1A0N8R1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Gm13148-201ENSMUST00000118892 745 ntBASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Gm18284-201ENSMUST00000172604 624 ntBASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav12-1A0N8R1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Mir6349-201ENSMUST00000184059 97 ntBASIC14.48□□□□□ -0.09
Trav12-1A0N8R1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms