Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc112A0AUP1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Mir6349-201ENSMUST00000184059 97 ntBASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.87■□□□□ 0.77
Ccdc112A0AUP1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 Gm11643-201ENSMUST00000119578 864 ntBASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc112A0AUP1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Gm12933-201ENSMUST00000120203 872 ntBASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc112A0AUP1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Gm10138-203ENSMUST00000206952 366 ntBASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc112A0AUP1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc112A0AUP1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc112A0AUP1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc112A0AUP1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc112A0AUP1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc112A0AUP1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc112A0AUP1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc112A0AUP1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Gm2559-201ENSMUST00000201323 363 ntBASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Gm4968-201ENSMUST00000071458 858 ntBASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc112A0AUP1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms