Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Gm26039-201ENSMUST00000158152 144 ntBASIC17.4■□□□□ 0.38
Gm3854A0A1B0GSS6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.4■□□□□ 0.38
Gm3854A0A1B0GSS6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3854A0A1B0GSS6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm3854A0A1B0GSS6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3854A0A1B0GSS6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3854A0A1B0GSS6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm3854A0A1B0GSS6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm3854A0A1B0GSS6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Gm3854A0A1B0GSS6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Gm3854A0A1B0GSS6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm3854A0A1B0GSS6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm10566-201ENSMUST00000086739 996 ntBASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Gm3854A0A1B0GSS6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm17807-201ENSMUST00000186869 298 ntBASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3854A0A1B0GSS6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm17971-201ENSMUST00000190239 806 ntBASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3854A0A1B0GSS6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3854A0A1B0GSS6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm28033-201ENSMUST00000184224 96 ntBASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms