Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.33□□□□□ -0.28
Trbv17A0A140T8P8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Gm12527-201ENSMUST00000117967 564 ntBASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Gm37856-201ENSMUST00000191634 999 ntBASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv17A0A140T8P8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Gm13158-201ENSMUST00000122007 736 ntBASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.31□□□□□ -0.28
Trbv17A0A140T8P8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Gm10138-203ENSMUST00000206952 366 ntBASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trbv17A0A140T8P8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.29□□□□□ -0.28
Trbv17A0A140T8P8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms