Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap99A0A140LIX9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.77■□□□□ 0.92
Cfap99A0A140LIX9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cfap99A0A140LIX9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cfap99A0A140LIX9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cfap99A0A140LIX9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Gm27463-201ENSMUST00000183569 57 ntBASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap99A0A140LIX9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfap99A0A140LIX9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cfap99A0A140LIX9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfap99A0A140LIX9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Cfap99A0A140LIX9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfap99A0A140LIX9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.75■□□□□ 0.91
Cfap99A0A140LIX9 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.75■□□□□ 0.91
Cfap99A0A140LIX9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfap99A0A140LIX9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfap99A0A140LIX9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Gm23634-201ENSMUST00000175071 91 ntBASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap99A0A140LIX9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap99A0A140LIX9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Gm10013-201ENSMUST00000106074 672 ntBASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Gm45058-201ENSMUST00000205810 766 ntBASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Cfap99A0A140LIX9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfap99A0A140LIX9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfap99A0A140LIX9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cfap99A0A140LIX9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfap99A0A140LIX9 Gm12085-201ENSMUST00000119263 940 ntBASIC20.71■□□□□ 0.91
Cfap99A0A140LIX9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cfap99A0A140LIX9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cfap99A0A140LIX9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.71■□□□□ 0.91
Cfap99A0A140LIX9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms