Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc194A0A140LIT1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Mir2861-201ENSMUST00000175539 82 ntBASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Mir8112-201ENSMUST00000184382 131 ntBASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Gm2559-201ENSMUST00000201323 363 ntBASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Gm4968-201ENSMUST00000071458 858 ntBASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc194A0A140LIT1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Gm37179-201ENSMUST00000194862 823 ntBASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc194A0A140LIT1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc194A0A140LIT1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc194A0A140LIT1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc194A0A140LIT1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.27■□□□□ 0.35
Ccdc194A0A140LIT1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc194A0A140LIT1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc194A0A140LIT1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc194A0A140LIT1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms