Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lcmt1A0A0U1RNF2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lcmt1A0A0U1RNF2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lcmt1A0A0U1RNF2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gm20760-201ENSMUST00000179197 648 ntBASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lcmt1A0A0U1RNF2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lcmt1A0A0U1RNF2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gm29257-201ENSMUST00000186115 639 ntBASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lcmt1A0A0U1RNF2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lcmt1A0A0U1RNF2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lcmt1A0A0U1RNF2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lcmt1A0A0U1RNF2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lcmt1A0A0U1RNF2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lcmt1A0A0U1RNF2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.27■□□□□ 0.67
Lcmt1A0A0U1RNF2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lcmt1A0A0U1RNF2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lcmt1A0A0U1RNF2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lcmt1A0A0U1RNF2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lcmt1A0A0U1RNF2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.26■□□□□ 0.67
Lcmt1A0A0U1RNF2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lcmt1A0A0U1RNF2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.26■□□□□ 0.67
Lcmt1A0A0U1RNF2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.26■□□□□ 0.67
Lcmt1A0A0U1RNF2 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Mir8112-201ENSMUST00000184382 131 ntBASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Gm18025-201ENSMUST00000221733 862 ntBASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lcmt1A0A0U1RNF2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt1A0A0U1RNF2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt1A0A0U1RNF2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt1A0A0U1RNF2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lcmt1A0A0U1RNF2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt1A0A0U1RNF2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt1A0A0U1RNF2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt1A0A0U1RNF2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lcmt1A0A0U1RNF2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms