Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Dio3-201ENSMUST00000097228 1449 ntBASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15375-201ENSMUST00000119510 849 ntBASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.21■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms