Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gm13158-201ENSMUST00000122007 736 ntBASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13n-4A0A0G2JG01 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.08□□□□□ -0.15
Trav13n-4A0A0G2JG01 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13n-4A0A0G2JG01 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13n-4A0A0G2JG01 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Trav13n-4A0A0G2JG01 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13n-4A0A0G2JG01 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm10698-201ENSMUST00000182663 604 ntBASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm37055-201ENSMUST00000191866 133 ntBASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13n-4A0A0G2JG01 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms