Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Mir6349-201ENSMUST00000184059 97 ntBASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm37055-201ENSMUST00000191866 133 ntBASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13n-1A0A0G2JEU8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav13n-1A0A0G2JEU8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms