Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trbv20A0A0B4J1H5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Gm29791-202ENSMUST00000207888 369 ntBASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv20A0A0B4J1H5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trbv20A0A0B4J1H5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv20A0A0B4J1H5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv20A0A0B4J1H5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv20A0A0B4J1H5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv20A0A0B4J1H5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Trbv20A0A0B4J1H5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv20A0A0B4J1H5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv20A0A0B4J1H5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Trbv20A0A0B4J1H5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv20A0A0B4J1H5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv20A0A0B4J1H5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Gm21956-201ENSMUST00000179946 522 ntBASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Reep4-203ENSMUST00000226563 1444 ntBASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv20A0A0B4J1H5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv20A0A0B4J1H5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms