Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm5874-201ENSMUST00000096101 508 ntBASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Haglr-201ENSMUST00000100000 2085 ntBASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.6□□□□□ -0.39
Trbv16A0A0B4J1H3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.59□□□□□ -0.39
Trbv16A0A0B4J1H3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv16A0A0B4J1H3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv16A0A0B4J1H3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv16A0A0B4J1H3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms