Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh7A0A0A6YY83 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh7A0A0A6YY83 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm715-201ENSMUST00000117865 831 ntBASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Timm23-208ENSMUST00000226683 750 ntBASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh7A0A0A6YY83 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm17661-201ENSMUST00000170317 270 ntBASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh7A0A0A6YY83 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh7A0A0A6YY83 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm38027-201ENSMUST00000192315 235 ntBASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Odf3b-204ENSMUST00000227834 930 ntBASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdh7A0A0A6YY83 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh7A0A0A6YY83 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh7A0A0A6YY83 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh7A0A0A6YY83 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh7A0A0A6YY83 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh7A0A0A6YY83 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm12085-201ENSMUST00000119263 940 ntBASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms