Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ighv1-47A0A0A6YY41 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Gm11927-201ENSMUST00000118472 759 ntBASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-47A0A0A6YY41 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-47A0A0A6YY41 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ighv1-47A0A0A6YY41 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-47A0A0A6YY41 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ighv1-47A0A0A6YY41 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
Ighv1-47A0A0A6YY41 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ighv1-47A0A0A6YY41 Dio3-201ENSMUST00000097228 1449 ntBASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Gm12441-201ENSMUST00000121806 588 ntBASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.32□□□□□ -0.12
Ighv1-47A0A0A6YY41 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms