Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Gm20760-201ENSMUST00000179197 648 ntBASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Gm10517-202ENSMUST00000192970 758 ntBASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv21A0A0A6YX06 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Gm10698-201ENSMUST00000182663 604 ntBASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv21A0A0A6YX06 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv21A0A0A6YX06 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv21A0A0A6YX06 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv21A0A0A6YX06 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv21A0A0A6YX06 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Gm10653-202ENSMUST00000139570 835 ntBASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv21A0A0A6YX06 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Gm24841-201ENSMUST00000158676 357 ntBASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv21A0A0A6YX06 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv21A0A0A6YX06 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv21A0A0A6YX06 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv21A0A0A6YX06 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv21A0A0A6YX06 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv21A0A0A6YX06 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv21A0A0A6YX06 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms