Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbc1A0A0A6YWV4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm8969-201ENSMUST00000199694 526 ntBASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm29791-202ENSMUST00000207888 369 ntBASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbc1A0A0A6YWV4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbc1A0A0A6YWV4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm715-201ENSMUST00000117865 831 ntBASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbc1A0A0A6YWV4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm10252-201ENSMUST00000209541 832 ntBASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbc1A0A0A6YWV4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbc1A0A0A6YWV4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms