Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6d-5A0A075B6B9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6d-5A0A075B6B9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm38285-201ENSMUST00000192928 922 ntBASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6d-5A0A075B6B9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-5A0A075B6B9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav6d-5A0A075B6B9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-5A0A075B6B9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-5A0A075B6B9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trav6d-5A0A075B6B9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav6d-5A0A075B6B9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6d-5A0A075B6B9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6d-5A0A075B6B9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6d-5A0A075B6B9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms