Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Gm13146-201ENSMUST00000118508 780 ntBASIC13.46□□□□□ -0.25
Trav16A0A075B653 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.46□□□□□ -0.25
Trav16A0A075B653 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav16A0A075B653 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trav16A0A075B653 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav16A0A075B653 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav16A0A075B653 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav16A0A075B653 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav16A0A075B653 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav16A0A075B653 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Gm13534-201ENSMUST00000121169 513 ntBASIC13.45□□□□□ -0.26
Trav16A0A075B653 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Gm43060-201ENSMUST00000200621 289 ntBASIC13.45□□□□□ -0.26
Trav16A0A075B653 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16A0A075B653 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16A0A075B653 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Gm43017-201ENSMUST00000198296 752 ntBASIC13.43□□□□□ -0.26
Trav16A0A075B653 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Gm9988-201ENSMUST00000069786 435 ntBASIC13.43□□□□□ -0.26
Trav16A0A075B653 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav16A0A075B653 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16A0A075B653 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms