Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13-1A0A075B644 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13-1A0A075B644 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Mir5122-201ENSMUST00000175004 89 ntBASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Gm37292-201ENSMUST00000192062 758 ntBASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13-1A0A075B644 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Gm5417-201ENSMUST00000079706 384 ntBASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13-1A0A075B644 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13-1A0A075B644 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13-1A0A075B644 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13-1A0A075B644 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13-1A0A075B644 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13-1A0A075B644 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms