Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Mir8112-201ENSMUST00000184382 131 ntBASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.77□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gm38285-201ENSMUST00000192928 922 ntBASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gm18671-201ENSMUST00000214826 683 ntBASIC14.77□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms