Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-6A0A075B603 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-6A0A075B603 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-6A0A075B603 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-6A0A075B603 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-6A0A075B603 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-6A0A075B603 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Trav6-6A0A075B603 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-6A0A075B603 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-6A0A075B603 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-6A0A075B603 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-6A0A075B603 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.94□□□□□ -0.34
Trav6-6A0A075B603 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms