Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm17661-201ENSMUST00000170317 270 ntBASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Il3ra-202ENSMUST00000223589 738 ntBASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm9987-201ENSMUST00000069768 567 ntBASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5-1A0A075B5Z7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm7889-201ENSMUST00000185591 958 ntBASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm18959-201ENSMUST00000208954 655 ntBASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5-1A0A075B5Z7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5-1A0A075B5Z7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm7791-201ENSMUST00000219066 539 ntBASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5-1A0A075B5Z7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav5-1A0A075B5Z7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms